STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43815.1SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain; SMART: ATPases associated with a variety of cellular activities; Pfam: Sigma-54 interaction domain. (452 aa)    
Predicted Functional Partners:
KOH44554.1
Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain); Pfam: PAS fold; SMART: His Kinase A (phosphoacceptor) domain; Pfam: His Kinase A (phospho-acceptor) domain; PRINTS: Bacterial sensor protein C-terminal signature; TIGRFAM: sensory_box: PAS domain S-box protein; SMART: Histidine kinase-like ATPases; SMART: PAS domain; Pfam: PAS domain.
  
 0.933
KOH43062.1
Histidine kinase; SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain.
  
 0.889
KOH44782.1
Pfam: His Kinase A (phospho-acceptor) domain; PRINTS: Bacterial sensor protein C-terminal signature; Pfam: PAS domain; TIGRFAM: sensory_box: PAS domain S-box protein; Pfam: PAS fold; SMART: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain); SMART: PAS domain; SMART: His Kinase A (phosphoacceptor) domain; Pfam: Response regulator receiver domain; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: cheY-homologous receiver domain.
  
 0.858
KOH45929.1
Hypothetical protein; Pfam: Response regulator receiver domain; SMART: cheY-homologous receiver domain.
  
 0.852
KOH44361.1
RNA polymerase sigma54 factor; Pfam: Sigma-54, DNA binding domain; TIGRFAM: rpoN_sigma: RNA polymerase sigma-54 factor; Pfam: Sigma-54 factor, core binding domain; Pfam: Sigma-54 factor, Activator interacting domain (AID); PRINTS: Sigma-54 factor signature.
 
 
 0.850
KOH45511.1
SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain; SMART: His Kinase A (phosphoacceptor) domain; PRINTS: Bacterial sensor protein C-terminal signature; Pfam: His Kinase A (phospho-acceptor) domain.
  
 0.849
KOH42689.1
Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PRINTS: Bacterial sensor protein C-terminal signature; SMART: Histidine kinase-like ATPases.
  
 0.842
KOH45130.1
Histidine kinase; Pfam: Response regulator receiver domain; SMART: cheY-homologous receiver domain; SMART: PAS domain; PRINTS: Bacterial sensor protein C-terminal signature; SMART: His Kinase A (phosphoacceptor) domain; Pfam: His Kinase A (phospho-acceptor) domain; Pfam: PAS fold; SMART: Histidine kinase-like ATPases; Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: sensory_box: PAS domain S-box protein.
  
 0.840
KOH46843.1
Hypothetical protein; Pfam: PAS fold; Pfam: PAS domain; SMART: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain); TIGRFAM: sensory_box: PAS domain S-box protein; SMART: PAS domain.
 
 
 0.819
KOH45470.1
TIGRFAM: pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; Pfam: Domain of unknown function; Pfam: 4Fe-4S dicluster domain; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; SMART: Domain of unknown function; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
    
 0.799
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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