STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43739.1Hypothetical protein; Pfam: 3-demethylubiquinone-9 3-methyltransferase. (207 aa)    
Predicted Functional Partners:
KOH46559.1
Hypothetical protein; Pfam: Activator of Hsp90 ATPase homolog 1-like protein.
    0.839
KOH46560.1
PhnB protein; Pfam: 3-demethylubiquinone-9 3-methyltransferase.
 
  
 0.830
KOH44333.1
Hypothetical protein; Pfam: NAD dependent epimerase/dehydratase family; Pfam: Domain of unknown function (DUF1731); TIGRFAM: yfcH: TIGR01777 family protein.
   
    0.690
KOH43307.1
Hypothetical protein.
   
    0.627
KOH46562.1
Dihydrofolate reductase; Pfam: RibD C-terminal domain.
 
    0.531
KOH43185.1
Hypothetical protein; Pfam: RibD C-terminal domain.
 
    0.504
KOH43740.1
Hemolysin D; TIGRFAM: hlyIII: channel protein, hemolysin III family; Pfam: Haemolysin-III related.
       0.473
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.