STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43313.1Hypothetical protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter. (270 aa)    
Predicted Functional Partners:
KOH43310.1
Pfam: Periplasmic binding protein.
 
 0.999
KOH43312.1
Hypothetical protein; Pfam: FecCD transport family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 0.999
KOH44653.1
Macrolide ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
 
   
0.908
KOH44160.1
Phosphate ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities; Belongs to the ABC transporter superfamily.
 
    
0.888
KOH43311.1
Hypothetical protein; Pfam: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.
 
  
  0.880
KOH46964.1
TIGRFAM: GxxExxY: GxxExxY protein; Pfam: PD-(D/E)XK nuclease superfamily.
  
 0.874
KOH46424.1
Hypothetical protein; Pfam: PD-(D/E)XK nuclease superfamily; TIGRFAM: GxxExxY: GxxExxY protein.
  
 0.874
KOH45220.1
TIGRFAM: GxxExxY: GxxExxY protein; Pfam: PD-(D/E)XK nuclease superfamily.
  
 0.874
KOH45226.1
Hypothetical protein; Pfam: PD-(D/E)XK nuclease superfamily; TIGRFAM: GxxExxY: GxxExxY protein.
  
 0.874
KOH44732.1
TIGRFAM: GxxExxY: GxxExxY protein; Pfam: PD-(D/E)XK nuclease superfamily.
  
 0.874
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.