STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43328.1Hypothetical protein. (378 aa)    
Predicted Functional Partners:
KOH45470.1
TIGRFAM: pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase; Pfam: Domain of unknown function; Pfam: 4Fe-4S dicluster domain; Pfam: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; SMART: Domain of unknown function; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
 
 0.854
KOH43599.1
Oxaloacetate decarboxylase; Pfam: HMGL-like; Pfam: Biotin-requiring enzyme; Pfam: Conserved carboxylase domain.
    
 0.780
KOH43329.1
PRINTS: Frankia sp. LanC-like protein signature; Pfam: Lanthionine synthetase C-like protein; PRINTS: LanC-like protein superfamily signature.
       0.773
KOH43330.1
Hypothetical protein.
       0.773
fabZ
hydroxymyristoyl-ACP dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.
     
 0.726
KOH46542.1
MFS transporter; TIGRFAM: OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit; Pfam: Pyruvate ferredoxin/flavodoxin oxidoreductase; Pfam: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg.
     
 0.642
KOH44137.1
Acyl dehydratase; Pfam: MaoC like domain.
 
 0.626
KOH44533.1
Hypothetical protein; Pfam: Enoyl-CoA hydratase/isomerase family.
 
 0.616
KOH42620.1
Hypothetical protein; Pfam: Aldo/keto reductase family; PRINTS: Aldo-keto reductase signature.
  
 
 0.587
KOH45021.1
Pfam: Malic enzyme, NAD binding domain; SMART: Malic enzyme, NAD binding domain; Pfam: Malic enzyme, N-terminal domain; Pfam: Phosphate acetyl/butaryl transferase.
    
 0.552
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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