STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43332.1Pfam: Glycosyl transferase family 2. (612 aa)    
Predicted Functional Partners:
KOH43331.1
Hypothetical protein.
  
 
  0.780
KOH43333.1
TIGRFAM: UDP-GALP_mutase: UDP-galactopyranose mutase; Pfam: UDP-galactopyranose mutase; Pfam: NAD(P)-binding Rossmann-like domain.
 
  
 0.690
KOH44674.1
Transcriptional antiterminator; Pfam: Glycosyltransferase family 20; TIGRFAM: T6PP: trehalose-phosphatase; TIGRFAM: HAD-SF-IIB: HAD hydrolase, family IIB; Pfam: Trehalose-phosphatase.
  
 
 0.584
KOH43163.1
Hypothetical protein; TIGRFAM: EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; Pfam: CoA-binding domain; Pfam: Bacterial sugar transferase.
 
  
 0.504
KOH46996.1
Hypothetical protein; Pfam: G-rich domain on putative tyrosine kinase; Pfam: Chain length determinant protein; TIGRFAM: eps_fam: capsular exopolysaccharide family; Pfam: AAA domain.
 
  
 0.412
KOH45554.1
Hypothetical protein; Pfam: G-rich domain on putative tyrosine kinase; Pfam: AAA domain; TIGRFAM: eps_fam: capsular exopolysaccharide family; Pfam: Chain length determinant protein.
 
  
 0.404
KOH43888.1
Hypothetical protein; Pfam: G-rich domain on putative tyrosine kinase; Pfam: AAA domain; Pfam: Chain length determinant protein.
 
  
 0.403
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.