STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43206.1Glycoside hydrolase family 5; SMART: Cellulose Binding Domain Type IV; Pfam: Cellulase (glycosyl hydrolase family 5); TIGRFAM: Por_Secre_tail: Por secretion system C-terminal sorting domain; Pfam: Carbohydrate binding module (family 6). (906 aa)    
Predicted Functional Partners:
KOH45431.1
Hypothetical protein.
   
  0.925
KOH43205.1
Beta-glucosidase; Pfam: Fibronectin type III-like domain.
 
  
  0.817
KOH43207.1
Pfam: Glycosyl hydrolases family 16.
 
  
  0.773
KOH43208.1
Licheninase; TIGRFAM: Por_Secre_tail: Por secretion system C-terminal sorting domain; Pfam: Glycosyl hydrolases family 16.
 
  
  0.759
KOH46026.1
Endoglucanase; Pfam: N-terminal ig-like domain of cellulase; Pfam: Glycosyl hydrolase family 9.
   
 
 0.693
KOH42517.1
Glycoside hydrolase; Pfam: N-terminal ig-like domain of cellulase.
   
 
 0.681
KOH44940.1
Hypothetical protein.
    
 0.591
KOH44481.1
Hypothetical protein; Pfam: SprB repeat; Pfam: HYR domain.
  
 
  0.567
KOH44958.1
Pfam: Glycosyl hydrolase family 3 C-terminal domain; Pfam: Glycosyl hydrolase family 3 N terminal domain; Pfam: PA14 domain; Pfam: Fibronectin type III-like domain; PRINTS: Glycosyl hydrolase family 3 signature; SMART:.
  
  
  0.543
KOH46800.1
Pfam: Cellulase (glycosyl hydrolase family 5); TIGRFAM: Por_Secre_tail: Por secretion system C-terminal sorting domain; Pfam: Carbohydrate binding domain; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.527
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.