STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH43028.1Hypothetical protein; Pfam: FtsX-like permease family; Pfam: MacB-like periplasmic core domain. (428 aa)    
Predicted Functional Partners:
KOH44653.1
Macrolide ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
  0.988
KOH45088.1
Peptide ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities.
  0.987
KOH43897.1
ABC transporter; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
 
  0.977
KOH46727.1
Macrolide ABC transporter ATP-binding protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
 
  0.975
lolD
ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  0.968
lolD-2
ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
 
  0.962
KOH43503.1
Phosphonate ABC transporter ATP-binding protein; Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities.
 
     0.917
KOH45065.1
Hypothetical protein; TIGRFAM: RND_mfp: efflux transporter, RND family, MFP subunit; Pfam: HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.848
KOH46827.1
Hypothetical protein; SMART: ATPases associated with a variety of cellular activities; Pfam: ABC transporter.
 
      0.682
KOH45690.1
Pfam: ABC transporter; SMART: ATPases associated with a variety of cellular activities; TIGRFAM: proV: glycine betaine/L-proline transport ATP binding subunit; Pfam: CBS domain.
 
      0.644
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.