STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH42748.1PRINTS: Bacterial regulatory protein ArsR family signature; SMART: helix_turn_helix, Arsenical Resistance Operon Repressor; Pfam: Helix-turn-helix domain. (99 aa)    
Predicted Functional Partners:
KOH42751.1
Pfam: Cytochrome C biogenesis protein transmembrane region.
 
   
 0.631
KOH42749.1
Pfam: Thioredoxin domain; TIGRFAM: redox_disulf_2: redox-active disulfide protein 2.
     
 0.509
KOH42750.1
Hypothetical protein.
       0.476
KOH42752.1
Permease; Pfam: Predicted permease.
  
  
 0.449
cobB
Hypothetical protein; Pfam: Sir2 family; Belongs to the sirtuin family. Class III subfamily.
  
 
  0.446
KOH42757.1
TIGRFAM: acr3: arsenical-resistance protein; Pfam: Sodium Bile acid symporter family.
  
  
 0.401
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.