STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KOH42637.1Pfam: Uncharacterized protein conserved in bacteria (DUF2264). (684 aa)    
Predicted Functional Partners:
KOH45749.1
Hypothetical protein; Pfam: Domain of unknown function (DUF4185).
  
     0.706
KOH45966.1
Hypothetical protein; Pfam: ATP-dependent DNA helicase recG C-terminal.
  
     0.701
KOH46769.1
Hypothetical protein; Pfam: SusD family; Pfam: Starch-binding associating with outer membrane.
  
     0.680
KOH44063.1
Beta-xylosidase; Pfam: Glycosyl hydrolases family 43.
  
     0.620
KOH45986.1
Hypothetical protein.
     0.615
KOH42570.1
Pfam: Glycosyl Hydrolase Family 88.
     0.582
KOH45747.1
Pfam: Protein of unknown function (DUF2961).
  
     0.579
KOH44065.1
Pfam: Alpha-L-arabinofuranosidase C-terminus; SMART: Alpha-L-arabinofuranosidase C-terminus; Pfam: Carbohydrate binding domain.
  
     0.538
KOH45299.1
Rhamnogalacturonan acetylesterase; Pfam: GDSL-like Lipase/Acylhydrolase family.
  
     0.533
KOH43476.1
Hypothetical protein; Pfam: Glycosyl Hydrolase Family 88.
     0.533
Your Current Organism:
Sunxiuqinia dokdonensis
NCBI taxonomy Id: 1409788
Other names: CGMCC 1.12676, JCM 19380, KCTC 32503, S. dokdonensis, Sunxiuqinia sp. DH1, strain DH1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.