STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621805_00525Unannotated protein. (233 aa)    
Predicted Functional Partners:
GCA_000621805_01495
Unannotated protein.
  
 0.974
GCA_000621805_00526
Unannotated protein.
 
 
 0.963
GCA_000621805_00496
Unannotated protein.
 
 
 0.836
GCA_000621805_00499
Unannotated protein.
 
   0.806
GCA_000621805_00925
Unannotated protein.
 
   0.804
GCA_000621805_01553
Unannotated protein.
 
   0.782
GCA_000621805_01264
Unannotated protein.
  
  0.735
GCA_000621805_01104
Unannotated protein.
 
 
 0.707
GCA_000621805_00527
Unannotated protein.
       0.639
GCA_000621805_00516
Unannotated protein.
    
  0.574
Your Current Organism:
Ruminococcus sp. FC2018
NCBI taxonomy Id: 1410617
Other names: R. sp. FC2018
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.