STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621805_01179Unannotated protein. (236 aa)    
Predicted Functional Partners:
GCA_000621805_01177
Unannotated protein.
  
  0.997
GCA_000621805_01176
Unannotated protein.
 
  
  0.980
GCA_000621805_01175
Unannotated protein.
 
 
  0.965
GCA_000621805_01178
Unannotated protein.
 
  
 
0.952
GCA_000621805_01180
Unannotated protein.
       0.757
GCA_000621805_01181
Unannotated protein.
       0.675
GCA_000621805_01182
Unannotated protein.
       0.675
GCA_000621805_01183
Unannotated protein.
       0.656
GCA_000621805_00026
Unannotated protein.
   
  0.616
GCA_000621805_00621
Unannotated protein.
   
  0.616
Your Current Organism:
Ruminococcus sp. FC2018
NCBI taxonomy Id: 1410617
Other names: R. sp. FC2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.