STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621805_02125Unannotated protein. (323 aa)    
Predicted Functional Partners:
GCA_000621805_02124
Unannotated protein.
      0.955
GCA_000621805_02126
Unannotated protein.
       0.818
GCA_000621805_00721
Unannotated protein.
   
    0.761
GCA_000621805_02127
Unannotated protein.
       0.740
GCA_000621805_02128
Unannotated protein.
       0.647
GCA_000621805_02122
Unannotated protein.
 
     0.643
GCA_000621805_02123
Unannotated protein.
       0.579
GCA_000621805_02121
Unannotated protein.
       0.519
GCA_000621805_02120
Unannotated protein.
 
     0.491
GCA_000621805_01167
Unannotated protein.
  
   
 0.465
Your Current Organism:
Ruminococcus sp. FC2018
NCBI taxonomy Id: 1410617
Other names: R. sp. FC2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.