STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702845_01783Unannotated protein. (325 aa)    
Predicted Functional Partners:
GCA_000702845_01782
Unannotated protein.
       0.773
GCA_000702845_01781
Unannotated protein.
       0.727
GCA_000702845_00812
Unannotated protein.
    
  0.500
GCA_000702845_01780
Unannotated protein.
       0.500
GCA_000702845_02535
Unannotated protein.
    
  0.491
GCA_000702845_00053
Unannotated protein.
    
 0.485
GCA_000702845_01152
Unannotated protein.
    
 0.485
GCA_000702845_01784
Unannotated protein.
       0.474
GCA_000702845_00432
Unannotated protein.
  
     0.421
Your Current Organism:
Lachnospiraceae bacterium FE2018
NCBI taxonomy Id: 1410624
Other names: L. bacterium FE2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.