STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702845_01916Unannotated protein. (405 aa)    
Predicted Functional Partners:
GCA_000702845_00224
Unannotated protein.
  
 
 0.932
GCA_000702845_01170
Unannotated protein.
  
 
 0.913
GCA_000702845_00483
Unannotated protein.
  
 
 0.907
GCA_000702845_00730
Unannotated protein.
  
 
 0.907
GCA_000702845_00480
Unannotated protein.
 
 0.906
GCA_000702845_00573
Unannotated protein.
  
 
 0.877
GCA_000702845_02429
Unannotated protein.
  
 
 0.866
GCA_000702845_00642
Unannotated protein.
  
 0.862
GCA_000702845_01138
Unannotated protein.
  
 
 0.860
GCA_000702845_01096
Unannotated protein.
   
 
 0.859
Your Current Organism:
Lachnospiraceae bacterium FE2018
NCBI taxonomy Id: 1410624
Other names: L. bacterium FE2018
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.