STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621905_01384Unannotated protein. (222 aa)    
Predicted Functional Partners:
GCA_000621905_01385
Unannotated protein.
      
0.773
GCA_000621905_01386
Unannotated protein.
       0.773
GCA_000621905_01387
Unannotated protein.
       0.658
GCA_000621905_01388
Unannotated protein.
       0.609
GCA_000621905_01383
Unannotated protein.
      
0.565
GCA_000621905_01389
Unannotated protein.
       0.514
GCA_000621905_01390
Unannotated protein.
       0.504
GCA_000621905_01391
Unannotated protein.
       0.504
GCA_000621905_01392
Unannotated protein.
       0.504
GCA_000621905_01393
Unannotated protein.
       0.504
Your Current Organism:
Lachnospiraceae bacterium NC2004
NCBI taxonomy Id: 1410626
Other names: L. bacterium NC2004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.