STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621905_02302Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_000621905_02297
Unannotated protein.
 
 
 
 0.884
GCA_000621905_02301
Unannotated protein.
     
 0.845
GCA_000621905_00752
Unannotated protein.
  
  
 0.707
GCA_000621905_00962
Unannotated protein.
 
 
 
 0.676
GCA_000621905_02303
Unannotated protein.
       0.668
GCA_000621905_02300
Unannotated protein.
       0.604
GCA_000621905_00659
Unannotated protein.
 
   
 0.603
GCA_000621905_02299
Unannotated protein.
     
 0.601
GCA_000621905_02298
Unannotated protein.
       0.591
GCA_000621905_00656
Unannotated protein.
      
 0.565
Your Current Organism:
Lachnospiraceae bacterium NC2004
NCBI taxonomy Id: 1410626
Other names: L. bacterium NC2004
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.