STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702085_00758Unannotated protein. (331 aa)    
Predicted Functional Partners:
GCA_000702085_00757
Unannotated protein.
 
 0.995
GCA_000702085_00734
Unannotated protein.
 
 0.979
GCA_000702085_01419
Unannotated protein.
 
 0.979
GCA_000702085_01470
Unannotated protein.
 
 0.979
GCA_000702085_01254
Unannotated protein.
    
  0.904
GCA_000702085_00143
Unannotated protein.
    
  0.888
GCA_000702085_02611
Unannotated protein.
    
  0.882
GCA_000702085_01034
Unannotated protein.
    
  0.874
GCA_000702085_01236
Unannotated protein.
     
 0.874
GCA_000702085_02335
Unannotated protein.
    
  0.855
Your Current Organism:
Lachnospiraceae bacterium P6A3
NCBI taxonomy Id: 1410630
Other names: L. bacterium P6A3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.