STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687695_01795Unannotated protein. (425 aa)    
Predicted Functional Partners:
GCA_000687695_00549
Unannotated protein.
 
 0.999
GCA_000687695_01796
Unannotated protein.
 
 
0.997
GCA_000687695_00292
Unannotated protein.
 
 
 0.960
GCA_000687695_00215
Unannotated protein.
 
 
 0.959
GCA_000687695_01521
Unannotated protein.
 
 
 0.959
GCA_000687695_01967
Unannotated protein.
 
 
 0.958
GCA_000687695_00790
Unannotated protein.
 
 
 0.957
GCA_000687695_00293
Unannotated protein.
  
 
 0.910
GCA_000687695_01602
Unannotated protein.
  
 
 0.910
GCA_000687695_00820
Unannotated protein.
  
 
 0.878
Your Current Organism:
Lachnospiraceae bacterium P6B14
NCBI taxonomy Id: 1410631
Other names: L. bacterium P6B14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.