STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621985_00850Unannotated protein. (510 aa)    
Predicted Functional Partners:
GCA_000621985_00851
Unannotated protein.
 
     0.953
GCA_000621985_00840
Unannotated protein.
 
     0.839
GCA_000621985_00848
Unannotated protein.
 
     0.827
GCA_000621985_00832
Unannotated protein.
 
     0.821
GCA_000621985_00820
Unannotated protein.
 
     0.794
GCA_000621985_00819
Unannotated protein.
 
     0.790
GCA_000621985_00815
Unannotated protein.
 
     0.783
GCA_000621985_00814
Unannotated protein.
 
     0.776
GCA_000621985_00847
Unannotated protein.
 
     0.774
GCA_000621985_00098
Unannotated protein.
  
     0.773
Your Current Organism:
Lachnospiraceae bacterium V9D3004
NCBI taxonomy Id: 1410632
Other names: L. bacterium V9D3004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.