STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000687655_00472Unannotated protein. (151 aa)    
Predicted Functional Partners:
GCA_000687655_00473
Unannotated protein.
 
 0.895
GCA_000687655_00476
Unannotated protein.
 
  
 0.815
GCA_000687655_01005
Unannotated protein.
 
  
 
0.800
GCA_000687655_00774
Unannotated protein.
 
 0.781
GCA_000687655_00777
Unannotated protein.
 
 
 0.780
GCA_000687655_00477
Unannotated protein.
 
  
 0.718
GCA_000687655_00776
Unannotated protein.
 
  
 0.681
GCA_000687655_01296
Unannotated protein.
 
  
 0.573
GCA_000687655_01491
Unannotated protein.
  
  
 0.512
GCA_000687655_00474
Unannotated protein.
       0.432
Your Current Organism:
Lachnospiraceae bacterium YSB2008
NCBI taxonomy Id: 1410633
Other names: L. bacterium YSB2008
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.