STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621765_02052Unannotated protein. (852 aa)    
Predicted Functional Partners:
GCA_000621765_02054
Unannotated protein.
 
    
0.836
GCA_000621765_02053
Unannotated protein.
 
    
0.818
GCA_000621765_02050
Unannotated protein.
 
     0.790
GCA_000621765_02055
Unannotated protein.
  
    0.777
GCA_000621765_00388
Unannotated protein.
 
 
 0.774
GCA_000621765_02056
Unannotated protein.
       0.773
GCA_000621765_02057
Unannotated protein.
  
    0.750
GCA_000621765_02048
Unannotated protein.
       0.727
GCA_000621765_02049
Unannotated protein.
       0.727
GCA_000621765_02051
Unannotated protein.
       0.727
Your Current Organism:
Ruminococcaceae bacterium AB4001
NCBI taxonomy Id: 1410638
Other names: R. bacterium AB4001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.