STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000621765_02658Unannotated protein. (387 aa)    
Predicted Functional Partners:
GCA_000621765_02571
Unannotated protein.
  
 
  0.823
GCA_000621765_01754
Unannotated protein.
     
 0.677
GCA_000621765_02191
Unannotated protein.
    
  0.661
GCA_000621765_01132
Unannotated protein.
   
 
  0.643
GCA_000621765_00032
Unannotated protein.
   
  0.609
GCA_000621765_00403
Unannotated protein.
    
  0.594
GCA_000621765_00740
Unannotated protein.
    
  0.594
GCA_000621765_00985
Unannotated protein.
    
  0.594
GCA_000621765_02181
Unannotated protein.
    
  0.594
GCA_000621765_02259
Unannotated protein.
  
     0.557
Your Current Organism:
Ruminococcaceae bacterium AB4001
NCBI taxonomy Id: 1410638
Other names: R. bacterium AB4001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.