STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000619945_02714Unannotated protein. (328 aa)    
Predicted Functional Partners:
GCA_000619945_02715
Unannotated protein.
 
 0.995
GCA_000619945_02716
Unannotated protein.
 
 
 0.966
GCA_000619945_02713
Unannotated protein.
 
 
 
0.953
GCA_000619945_00099
Unannotated protein.
  
  
  0.783
GCA_000619945_01904
Unannotated protein.
  
 
  0.706
GCA_000619945_01930
Unannotated protein.
  
  
 0.608
GCA_000619945_01769
Unannotated protein.
 
  
 0.596
GCA_000619945_04322
Unannotated protein.
  
 
 0.573
GCA_000619945_00077
Unannotated protein.
    
 0.492
GCA_000619945_00795
Unannotated protein.
     
 0.489
Your Current Organism:
Clostridium lundense
NCBI taxonomy Id: 1410653
Other names: C. lundense DSM 17049, Clostridium lundense DSM 17049
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.