STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000702205_01125Unannotated protein. (393 aa)    
Predicted Functional Partners:
GCA_000702205_01126
Unannotated protein.
   
  0.936
GCA_000702205_01130
Unannotated protein.
  
 
 0.890
GCA_000702205_01135
Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family.
  
 
 0.794
GCA_000702205_02273
Unannotated protein.
  
  
 0.788
GCA_000702205_02213
Unannotated protein.
    
  0.739
GCA_000702205_00461
Unannotated protein.
    
  0.738
GCA_000702205_01779
Unannotated protein.
    
 
0.734
GCA_000702205_01416
Unannotated protein; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.
     
 0.727
GCA_000702205_00985
Unannotated protein.
    
  0.703
GCA_000702205_00914
Unannotated protein.
   
 
 0.695
Your Current Organism:
Lachnospira multipara
NCBI taxonomy Id: 1410661
Other names: L. multipara LB2003, Lachnospira multipara LB2003
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.