STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALW83662.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
ALW85942.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
AUC43_19640
Inorganic pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.743
ALW84238.1
Zinc/iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
ALW86522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.701
ALW86941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
ALW85866.1
Fructose-6-phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
AUC43_00960
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
ALW84007.1
Formiminoglutamase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
  
     0.660
ALW85993.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.631
ALW83796.1
Cell division protein ZapA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.608
Your Current Organism:
Hymenobacter sedentarius
NCBI taxonomy Id: 1411621
Other names: H. sedentarius, Hymenobacter sedentarius Lee et al. 2016, Hymenobacter sp. DG5B, JCM 19636, KCTC 32524, strain DG5B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.