STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
regAResponse regulator PrrA. (175 aa)    
Predicted Functional Partners:
regB
Sensor histidine kinase RegB.
 
 0.997
cph2_3
Bacteriophytochrome cph2.
   
 0.941
fixL_1
Sensor protein FixL.
 
  
 0.835
yegE
Putative diguanylate cyclase YegE.
     
 0.830
barA
Signal transduction histidine-protein kinase BarA.
 
 
 0.802
zraS
Sensor protein ZraS.
 
  
 0.776
ETN91655.1
Outer membrane receptor FepA.
       0.775
kinE
Sporulation kinase E.
   
 0.659
dctB
C4-dicarboxylate transport sensor protein DctB.
 
  
 0.524
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
  
 
 
 0.516
Your Current Organism:
Gammaproteobacteria bacterium MOLA455
NCBI taxonomy Id: 1411685
Other names: G. bacterium MOLA455
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.