STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ESS09819.1Lycopene cyclase domain protein. (248 aa)    
Predicted Functional Partners:
ESS09973.1
Phytoene desaturase.
 
  
 0.949
ESS10224.1
Bacteriorhodopsin.
 
   
 0.746
ESS08869.1
Bacteriorhodopsin.
  
     0.738
ESS09810.1
Bacteriorhodopsin.
  
     0.695
ESS07880.1
Bacteriorhodopsin.
  
     0.681
ESS09817.1
O-sialoglycoprotein endopeptidase.
       0.550
rps24e
SSU ribosomal protein S24E; Belongs to the eukaryotic ribosomal protein eS24 family.
       0.550
ESS09820.1
Hypothetical protein.
       0.456
ESS09246.1
Farnesyl-diphosphate farnesyltransferase.
  
   
 0.450
Your Current Organism:
uncultured archaeon A07HN63
NCBI taxonomy Id: 1412873
Other names: u. archaeon A07HN63
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.