STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXG42886.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (220 aa)    
Predicted Functional Partners:
KXG42885.1
Hemolysin XhlA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.775
KXG42887.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.732
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.
   
  0.617
KXG42596.1
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 
 0.616
KXG42827.1
Type I citrate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.
    
   0.605
KXG43480.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.490
KXG42881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.447
KXG42882.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.447
KXG42883.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.447
KXG42884.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.447
Your Current Organism:
Tepidibacillus decaturensis
NCBI taxonomy Id: 1413211
Other names: ATCC BAA-2644, DSM 103037, T. decaturensis, Tepidibacillus decaturensis Dong et al. 2016, Tepidibacillus sp. Z9, Tepidibacillus sp. Z9_1, Tepidibacillus sp. Z9_2, strain Z9
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