Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD02512.1 | CQD02515.1 | BN1232_00142 | BN1232_00143 | Hypothetical protein. | Lipopolysaccharide core biosynthesis protein. | 0.798 |
CQD02512.1 | CQD02518.1 | BN1232_00142 | BN1232_00144 | Hypothetical protein. | Glycosyltransferase family 9 (heptosyltransferase). | 0.608 |
CQD02512.1 | CQD02521.1 | BN1232_00142 | BN1232_00145 | Hypothetical protein. | Sulfotransferase domain protein. | 0.577 |
CQD02512.1 | ybaB_1 | BN1232_00142 | BN1232_00146 | Hypothetical protein. | Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.445 |
CQD02515.1 | CQD02512.1 | BN1232_00143 | BN1232_00142 | Lipopolysaccharide core biosynthesis protein. | Hypothetical protein. | 0.798 |
CQD02515.1 | CQD02518.1 | BN1232_00143 | BN1232_00144 | Lipopolysaccharide core biosynthesis protein. | Glycosyltransferase family 9 (heptosyltransferase). | 0.570 |
CQD02515.1 | CQD02521.1 | BN1232_00143 | BN1232_00145 | Lipopolysaccharide core biosynthesis protein. | Sulfotransferase domain protein. | 0.567 |
CQD02515.1 | ybaB_1 | BN1232_00143 | BN1232_00146 | Lipopolysaccharide core biosynthesis protein. | Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.455 |
CQD02518.1 | CQD02512.1 | BN1232_00144 | BN1232_00142 | Glycosyltransferase family 9 (heptosyltransferase). | Hypothetical protein. | 0.608 |
CQD02518.1 | CQD02515.1 | BN1232_00144 | BN1232_00143 | Glycosyltransferase family 9 (heptosyltransferase). | Lipopolysaccharide core biosynthesis protein. | 0.570 |
CQD02518.1 | CQD02521.1 | BN1232_00144 | BN1232_00145 | Glycosyltransferase family 9 (heptosyltransferase). | Sulfotransferase domain protein. | 0.769 |
CQD02518.1 | ybaB_1 | BN1232_00144 | BN1232_00146 | Glycosyltransferase family 9 (heptosyltransferase). | Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.607 |
CQD02521.1 | CQD02512.1 | BN1232_00145 | BN1232_00142 | Sulfotransferase domain protein. | Hypothetical protein. | 0.577 |
CQD02521.1 | CQD02515.1 | BN1232_00145 | BN1232_00143 | Sulfotransferase domain protein. | Lipopolysaccharide core biosynthesis protein. | 0.567 |
CQD02521.1 | CQD02518.1 | BN1232_00145 | BN1232_00144 | Sulfotransferase domain protein. | Glycosyltransferase family 9 (heptosyltransferase). | 0.769 |
CQD02521.1 | eccE1 | BN1232_00145 | BN1232_00147 | Sulfotransferase domain protein. | ESX-1 secretion system protein EccE1. | 0.404 |
CQD02521.1 | ybaB_1 | BN1232_00145 | BN1232_00146 | Sulfotransferase domain protein. | Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.616 |
atpH | yajC | BN1232_04401 | BN1232_02339 | F0F1 ATP synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | Preprotein translocase subunit YajC. | 0.773 |
atpH | ybaB_1 | BN1232_04401 | BN1232_00146 | F0F1 ATP synthase subunit delta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction; Belongs to the ATPase delta chain family. | Nucleoid-associated protein YbaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family. | 0.464 |
dnaZX | holB | BN1232_05528 | BN1232_05402 | DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase III subunit delta'. | 0.896 |
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