STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD02772.1Transcriptional regulator; Belongs to the UPF0301 (AlgH) family. (201 aa)    
Predicted Functional Partners:
nrdE
Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
 0.999
CQD21944.1
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 
 0.887
CQD05778.1
Thioredoxin.
  
 
 0.881
CQD05384.1
DipZ protein.
   
 
 0.865
dipZ
Cytochrome C biogenesis protein DipZ.
   
 
 0.865
thiX
Thioredoxin.
   
 
 0.864
CQD20010.1
TetR family transcriptional regulator.
   
    0.859
CQD12461.1
Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
  
  
 0.839
CQD12982.1
Exported conserved protein.
  
    0.824
CQD06459.1
TetR family transcriptional regulator.
   
    0.818
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.