Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD02810.1 | CQD02813.1 | BN1232_00240 | BN1232_00241 | Hypothetical protein. | AP endonuclease, family protein 2. | 0.959 |
CQD02810.1 | CQD02817.1 | BN1232_00240 | BN1232_00242 | Hypothetical protein. | Sulfotransferase family protein. | 0.964 |
CQD02810.1 | CQD02822.1 | BN1232_00240 | BN1232_00243 | Hypothetical protein. | F420-dependent methylene-tetrahydromethanopterin reductase. | 0.914 |
CQD02813.1 | CQD02810.1 | BN1232_00241 | BN1232_00240 | AP endonuclease, family protein 2. | Hypothetical protein. | 0.959 |
CQD02813.1 | CQD02817.1 | BN1232_00241 | BN1232_00242 | AP endonuclease, family protein 2. | Sulfotransferase family protein. | 0.956 |
CQD02813.1 | CQD02822.1 | BN1232_00241 | BN1232_00243 | AP endonuclease, family protein 2. | F420-dependent methylene-tetrahydromethanopterin reductase. | 0.891 |
CQD02817.1 | CQD02810.1 | BN1232_00242 | BN1232_00240 | Sulfotransferase family protein. | Hypothetical protein. | 0.964 |
CQD02817.1 | CQD02813.1 | BN1232_00242 | BN1232_00241 | Sulfotransferase family protein. | AP endonuclease, family protein 2. | 0.956 |
CQD02817.1 | CQD02822.1 | BN1232_00242 | BN1232_00243 | Sulfotransferase family protein. | F420-dependent methylene-tetrahydromethanopterin reductase. | 0.889 |
CQD02817.1 | CQD09981.1 | BN1232_00242 | BN1232_01827 | Sulfotransferase family protein. | Immunogenic protein MPB64/MPT64. | 0.854 |
CQD02817.1 | CQD16945.1 | BN1232_00242 | BN1232_03696 | Sulfotransferase family protein. | Immunogenic protein MPB64/MPT64. | 0.854 |
CQD02817.1 | alaS | BN1232_00242 | BN1232_02380 | Sulfotransferase family protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.914 |
CQD02817.1 | htpG | BN1232_00242 | BN1232_03641 | Sulfotransferase family protein. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.910 |
CQD02817.1 | rpoA | BN1232_00242 | BN1232_01216 | Sulfotransferase family protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.880 |
CQD02817.1 | rpoB | BN1232_00242 | BN1232_01094 | Sulfotransferase family protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.865 |
CQD02817.1 | rpoZ | BN1232_00242 | BN1232_02419 | Sulfotransferase family protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.865 |
CQD02822.1 | CQD02810.1 | BN1232_00243 | BN1232_00240 | F420-dependent methylene-tetrahydromethanopterin reductase. | Hypothetical protein. | 0.914 |
CQD02822.1 | CQD02813.1 | BN1232_00243 | BN1232_00241 | F420-dependent methylene-tetrahydromethanopterin reductase. | AP endonuclease, family protein 2. | 0.891 |
CQD02822.1 | CQD02817.1 | BN1232_00243 | BN1232_00242 | F420-dependent methylene-tetrahydromethanopterin reductase. | Sulfotransferase family protein. | 0.889 |
CQD09981.1 | CQD02817.1 | BN1232_01827 | BN1232_00242 | Immunogenic protein MPB64/MPT64. | Sulfotransferase family protein. | 0.854 |
page 1 of 3