Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD02944.1 | CQD02950.1 | BN1232_00285 | BN1232_00287 | MarR family transcriptional regulator. | Antitoxin. | 0.458 |
CQD02944.1 | CQD08738.1 | BN1232_00285 | BN1232_01576 | MarR family transcriptional regulator. | XRE family transcriptional regulator. | 0.421 |
CQD02944.1 | CQD14999.1 | BN1232_00285 | BN1232_03195 | MarR family transcriptional regulator. | DNA-binding protein. | 0.421 |
CQD02944.1 | coaE | BN1232_00285 | BN1232_02643 | MarR family transcriptional regulator. | dephospho-CoA kinase domain fusion protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.573 |
CQD02944.1 | vapC | BN1232_00285 | BN1232_00286 | MarR family transcriptional regulator. | PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.458 |
CQD02950.1 | CQD02944.1 | BN1232_00287 | BN1232_00285 | Antitoxin. | MarR family transcriptional regulator. | 0.458 |
CQD02950.1 | vapC | BN1232_00287 | BN1232_00286 | Antitoxin. | PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | 0.954 |
CQD08738.1 | CQD02944.1 | BN1232_01576 | BN1232_00285 | XRE family transcriptional regulator. | MarR family transcriptional regulator. | 0.421 |
CQD14999.1 | CQD02944.1 | BN1232_03195 | BN1232_00285 | DNA-binding protein. | MarR family transcriptional regulator. | 0.421 |
coaE | CQD02944.1 | BN1232_02643 | BN1232_00285 | dephospho-CoA kinase domain fusion protein; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | MarR family transcriptional regulator. | 0.573 |
vapC | CQD02944.1 | BN1232_00286 | BN1232_00285 | PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | MarR family transcriptional regulator. | 0.458 |
vapC | CQD02950.1 | BN1232_00286 | BN1232_00287 | PilT domain-containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. | Antitoxin. | 0.954 |