STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD04365.1acyl-CoA synthetase. (538 aa)    
Predicted Functional Partners:
CQD17231.1
Linear gramicidin synthetase subunit D.
  
0.922
CQD13138.1
Linear gramicidin synthetase subunit B.
  
0.917
ppsD
Phenolpthiocerol synthesis type-I polyketide synthase PpsD.
 
 0.915
mas
Multifunctional mycocerosic acid synthase membrane-associated MAS.
 
 0.893
ppsC
Phenolpthiocerol synthesis type-I polyketide synthase PpsC.
 
 0.893
CQD17342.1
Beta-ketoacyl synthase.
  
 0.893
CQD13553.1
RifB protein.
 
 0.880
CQD13555.1
Erythronolide synthase, modules 3 and 4.
 
 0.880
fas
Fatty acid synthase Fas.
  
 
 0.864
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.830
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.