STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD07182.1TetR family transcriptional regulator. (264 aa)    
Predicted Functional Partners:
CQD07187.1
Oxidoreductase.
 
     0.612
hab
Hydroxylaminobenzene mutase HAB.
       0.588
CQD13044.1
Methyltransferase MtfC.
  
     0.568
CQD13047.1
MtfD protein.
  
     0.564
CQD13033.1
Methyltransferase MtfC.
  
     0.563
CQD09151.1
Hypothetical protein.
  
     0.502
CQD18505.1
Hypothetical protein.
  
     0.443
CQD11294.1
Small-conductance mechanosensitive channel.
  
     0.429
CQD07197.1
C5-O-methyltransferase.
   
   0.426
CQD07191.1
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
       0.420
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.