STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD08391.1Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA. (231 aa)    
Predicted Functional Partners:
CQD03631.1
Oxidoreductase FAD-binding subunit.
  
 0.885
CQD08141.1
Oxidoreductase.
  
 0.885
CQD11190.1
Oxidoreductase.
  
 0.885
CQD14597.1
Oxygenase.
  
 0.885
CQD18838.1
Flavodoxin reductase family protein.
  
 0.885
CQD20934.1
FdxB protein.
  
 0.885
CQD21149.1
Phthalate 4,5-dioxygenase.
  
 0.885
hmp
Flavodoxin reductase Hmp.
  
 0.885
CQD12884.1
Putative metal-sulfur cluster biosynthetic enzyme.
  
 
 0.755
CQD17912.1
4Fe-4S ferredoxin.
  
 
  0.618
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.