Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD10130.1 | CQD10451.1 | BN1232_01856 | BN1232_01927 | Acyl carrier protein. | Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
CQD10130.1 | CQD15358.1 | BN1232_01856 | BN1232_03284 | Acyl carrier protein. | Hydrogen dehydrogenase. | 0.998 |
CQD10130.1 | CQD15500.1 | BN1232_01856 | BN1232_03321 | Acyl carrier protein. | Erythronolide synthase, modules 3 and 4. | 0.911 |
CQD10130.1 | CQD16392.1 | BN1232_01856 | BN1232_03543 | Acyl carrier protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.933 |
CQD10130.1 | fas | BN1232_01856 | BN1232_04263 | Acyl carrier protein. | Fatty acid synthase Fas. | 0.999 |
CQD10130.1 | nuoB | BN1232_01856 | BN1232_01601 | Acyl carrier protein. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.909 |
CQD10130.1 | nuoB-2 | BN1232_01856 | BN1232_05796 | Acyl carrier protein. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.909 |
CQD10130.1 | nuoC | BN1232_01856 | BN1232_01600 | Acyl carrier protein. | NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.933 |
CQD10130.1 | nuoC-2 | BN1232_01856 | BN1232_05797 | Acyl carrier protein. | NADH/F420H2 dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. | 0.933 |
CQD10130.1 | nuoI | BN1232_01856 | BN1232_01594 | Acyl carrier protein. | NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.906 |
CQD10451.1 | CQD10130.1 | BN1232_01927 | BN1232_01856 | Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acyl carrier protein. | 0.999 |
CQD10451.1 | CQD15358.1 | BN1232_01927 | BN1232_03284 | Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Hydrogen dehydrogenase. | 0.529 |
CQD10451.1 | CQD15500.1 | BN1232_01927 | BN1232_03321 | Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Erythronolide synthase, modules 3 and 4. | 0.999 |
CQD10451.1 | CQD16392.1 | BN1232_01927 | BN1232_03543 | Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Malonyl CoA-acyl carrier protein transacylase. | 0.998 |
CQD10451.1 | fas | BN1232_01927 | BN1232_04263 | Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Fatty acid synthase Fas. | 0.999 |
CQD15358.1 | CQD10130.1 | BN1232_03284 | BN1232_01856 | Hydrogen dehydrogenase. | Acyl carrier protein. | 0.998 |
CQD15358.1 | CQD10451.1 | BN1232_03284 | BN1232_01927 | Hydrogen dehydrogenase. | Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.529 |
CQD15358.1 | CQD15500.1 | BN1232_03284 | BN1232_03321 | Hydrogen dehydrogenase. | Erythronolide synthase, modules 3 and 4. | 0.809 |
CQD15358.1 | fas | BN1232_03284 | BN1232_04263 | Hydrogen dehydrogenase. | Fatty acid synthase Fas. | 0.616 |
CQD15358.1 | nuoB | BN1232_03284 | BN1232_01601 | Hydrogen dehydrogenase. | NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.999 |
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