STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD10689.1ANTAR domain-containing protein. (257 aa)    
Predicted Functional Partners:
CQD22017.1
Stage II sporulation protein E (SpoIIE).
 
 0.954
CQD16839.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.946
CQD19640.1
Amino acid ABC transporter substrate-binding protein.
  
 
 0.844
CQD17378.1
Adenylate and guanylate cyclase catalytic domain-containing protein.
    
 0.801
ribA1
Riboflavin biosynthesis protein RibA; In the N-terminal section; belongs to the DHBP synthase family.
    
  0.781
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.742
CQD07900.1
Two-component sensor protein.
    
 0.730
CQD13385.1
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
   
 0.690
CQD13770.1
Adenylylate/guanylate cyclase.
   
 0.690
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
   0.659
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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