Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD10987.1 | CQD14014.1 | BN1232_02037 | BN1232_02883 | Mycothione reductase. | Dihydrolipoamide acetyltransferase. | 0.944 |
CQD10987.1 | CQD14018.1 | BN1232_02037 | BN1232_02884 | Mycothione reductase. | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. | 0.960 |
CQD10987.1 | CQD14021.1 | BN1232_02037 | BN1232_02885 | Mycothione reductase. | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit. | 0.997 |
CQD10987.1 | CQD15161.1 | BN1232_02037 | BN1232_03235 | Mycothione reductase. | Pyruvate dehydrogenase E1 component (beta subunit); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.958 |
CQD10987.1 | CQD15165.1 | BN1232_02037 | BN1232_03236 | Mycothione reductase. | Branched-chain alpha-keto acid dehydrogenase subunit E2. | 0.972 |
CQD10987.1 | CQD16197.1 | BN1232_02037 | BN1232_03491 | Mycothione reductase. | Dihydrolipoamide acetyltransferase. | 0.957 |
CQD10987.1 | CQD16203.1 | BN1232_02037 | BN1232_03493 | Mycothione reductase. | Dihydrolipoamide acetyltransferase. | 0.970 |
CQD10987.1 | CQD19299.1 | BN1232_02037 | BN1232_04510 | Mycothione reductase. | Alpha-ketoglutarate decarboxylase. | 0.999 |
CQD10987.1 | gcvH | BN1232_02037 | BN1232_02949 | Mycothione reductase. | Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.926 |
CQD10987.1 | prsA | BN1232_02037 | BN1232_04750 | Mycothione reductase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.942 |
CQD14014.1 | CQD10987.1 | BN1232_02883 | BN1232_02037 | Dihydrolipoamide acetyltransferase. | Mycothione reductase. | 0.944 |
CQD14014.1 | CQD14018.1 | BN1232_02883 | BN1232_02884 | Dihydrolipoamide acetyltransferase. | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. | 0.995 |
CQD14014.1 | CQD14021.1 | BN1232_02883 | BN1232_02885 | Dihydrolipoamide acetyltransferase. | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit. | 0.999 |
CQD14014.1 | CQD15161.1 | BN1232_02883 | BN1232_03235 | Dihydrolipoamide acetyltransferase. | Pyruvate dehydrogenase E1 component (beta subunit); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.974 |
CQD14014.1 | CQD19299.1 | BN1232_02883 | BN1232_04510 | Dihydrolipoamide acetyltransferase. | Alpha-ketoglutarate decarboxylase. | 0.998 |
CQD14014.1 | gcvH | BN1232_02883 | BN1232_02949 | Dihydrolipoamide acetyltransferase. | Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.914 |
CQD14014.1 | prsA | BN1232_02883 | BN1232_04750 | Dihydrolipoamide acetyltransferase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.971 |
CQD14018.1 | CQD10987.1 | BN1232_02884 | BN1232_02037 | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. | Mycothione reductase. | 0.960 |
CQD14018.1 | CQD14014.1 | BN1232_02884 | BN1232_02883 | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. | Dihydrolipoamide acetyltransferase. | 0.995 |
CQD14018.1 | CQD14021.1 | BN1232_02884 | BN1232_02885 | Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta. | Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit. | 0.999 |
page 1 of 6