Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD02268.1 | CQD16404.1 | BN1232_00056 | BN1232_03546 | long-chain-fatty-acid--CoA ligase. | 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.851 |
CQD02268.1 | CQD16409.1 | BN1232_00056 | BN1232_03547 | long-chain-fatty-acid--CoA ligase. | Acetyl/propionyl CoA carboxylase subunit beta. | 0.455 |
CQD02268.1 | efpA | BN1232_00056 | BN1232_02045 | long-chain-fatty-acid--CoA ligase. | Integral membrane efflux protein EFPA. | 0.796 |
CQD02268.1 | kasA | BN1232_00056 | BN1232_03545 | long-chain-fatty-acid--CoA ligase. | 3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.850 |
CQD11004.1 | CQD11011.1 | BN1232_02040 | BN1232_02041 | Acetyltransferase, gnat family protein. | Magnesium chelatase. | 0.936 |
CQD11004.1 | cobB | BN1232_02040 | BN1232_02043 | Acetyltransferase, gnat family protein. | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.906 |
CQD11004.1 | cobO | BN1232_02040 | BN1232_02042 | Acetyltransferase, gnat family protein. | cob(I)alamin adenosyltransferase CobO. | 0.877 |
CQD11004.1 | cysG | BN1232_02040 | BN1232_02044 | Acetyltransferase, gnat family protein. | Multifunctional enzyme siroheme synthase CYSG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase. | 0.729 |
CQD11004.1 | efpA | BN1232_02040 | BN1232_02045 | Acetyltransferase, gnat family protein. | Integral membrane efflux protein EFPA. | 0.699 |
CQD11011.1 | CQD11004.1 | BN1232_02041 | BN1232_02040 | Magnesium chelatase. | Acetyltransferase, gnat family protein. | 0.936 |
CQD11011.1 | cobB | BN1232_02041 | BN1232_02043 | Magnesium chelatase. | Cobyrinic Acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family. | 0.942 |
CQD11011.1 | cobO | BN1232_02041 | BN1232_02042 | Magnesium chelatase. | cob(I)alamin adenosyltransferase CobO. | 0.936 |
CQD11011.1 | cysG | BN1232_02041 | BN1232_02044 | Magnesium chelatase. | Multifunctional enzyme siroheme synthase CYSG: uroporphyrin-III C-methyltransferase + precorrin-2 oxidase + ferrochelatase. | 0.813 |
CQD11011.1 | efpA | BN1232_02041 | BN1232_02045 | Magnesium chelatase. | Integral membrane efflux protein EFPA. | 0.699 |
CQD13450.1 | efpA | BN1232_02655 | BN1232_02045 | Drug efflux membrane protein. | Integral membrane efflux protein EFPA. | 0.732 |
CQD16404.1 | CQD02268.1 | BN1232_03546 | BN1232_00056 | 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | long-chain-fatty-acid--CoA ligase. | 0.851 |
CQD16404.1 | CQD16409.1 | BN1232_03546 | BN1232_03547 | 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Acetyl/propionyl CoA carboxylase subunit beta. | 0.998 |
CQD16404.1 | efpA | BN1232_03546 | BN1232_02045 | 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Integral membrane efflux protein EFPA. | 0.813 |
CQD16404.1 | kasA | BN1232_03546 | BN1232_03545 | 3-oxoacyl-(acyl carrier protein) synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 3-oxoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.964 |
CQD16409.1 | CQD02268.1 | BN1232_03547 | BN1232_00056 | Acetyl/propionyl CoA carboxylase subunit beta. | long-chain-fatty-acid--CoA ligase. | 0.455 |
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