Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD02417.1 | CQD11955.1 | BN1232_00111 | BN1232_02256 | Ferredoxin-dependent glutamate synthase 1. | Hypothetical protein. | 0.857 |
CQD02417.1 | CQD12924.1 | BN1232_00111 | BN1232_02491 | Ferredoxin-dependent glutamate synthase 1. | Aconitate hydratase. | 0.631 |
CQD02417.1 | CQD18310.1 | BN1232_00111 | BN1232_04181 | Ferredoxin-dependent glutamate synthase 1. | Pyruvate synthase. | 0.980 |
CQD02417.1 | CQD18375.1 | BN1232_00111 | BN1232_04203 | Ferredoxin-dependent glutamate synthase 1. | NAD-glutamate dehydrogenase. | 0.953 |
CQD02417.1 | CQD22848.1 | BN1232_00111 | BN1232_05759 | Ferredoxin-dependent glutamate synthase 1. | Aconitate hydratase. | 0.631 |
CQD02417.1 | mdh | BN1232_00111 | BN1232_04515 | Ferredoxin-dependent glutamate synthase 1. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.957 |
CQD11955.1 | CQD02417.1 | BN1232_02256 | BN1232_00111 | Hypothetical protein. | Ferredoxin-dependent glutamate synthase 1. | 0.857 |
CQD11955.1 | CQD11957.1 | BN1232_02256 | BN1232_02257 | Hypothetical protein. | Hypothetical protein. | 0.773 |
CQD11955.1 | CQD12924.1 | BN1232_02256 | BN1232_02491 | Hypothetical protein. | Aconitate hydratase. | 0.410 |
CQD11955.1 | CQD18310.1 | BN1232_02256 | BN1232_04181 | Hypothetical protein. | Pyruvate synthase. | 0.844 |
CQD11955.1 | CQD18375.1 | BN1232_02256 | BN1232_04203 | Hypothetical protein. | NAD-glutamate dehydrogenase. | 0.477 |
CQD11955.1 | CQD22848.1 | BN1232_02256 | BN1232_05759 | Hypothetical protein. | Aconitate hydratase. | 0.410 |
CQD11955.1 | mdh | BN1232_02256 | BN1232_04515 | Hypothetical protein. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.526 |
CQD11957.1 | CQD11955.1 | BN1232_02257 | BN1232_02256 | Hypothetical protein. | Hypothetical protein. | 0.773 |
CQD12924.1 | CQD02417.1 | BN1232_02491 | BN1232_00111 | Aconitate hydratase. | Ferredoxin-dependent glutamate synthase 1. | 0.631 |
CQD12924.1 | CQD11955.1 | BN1232_02491 | BN1232_02256 | Aconitate hydratase. | Hypothetical protein. | 0.410 |
CQD12924.1 | CQD18310.1 | BN1232_02491 | BN1232_04181 | Aconitate hydratase. | Pyruvate synthase. | 0.861 |
CQD12924.1 | CQD22848.1 | BN1232_02491 | BN1232_05759 | Aconitate hydratase. | Aconitate hydratase. | 0.918 |
CQD12924.1 | mdh | BN1232_02491 | BN1232_04515 | Aconitate hydratase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.630 |
CQD18310.1 | CQD02417.1 | BN1232_04181 | BN1232_00111 | Pyruvate synthase. | Ferredoxin-dependent glutamate synthase 1. | 0.980 |
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