STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD12116.1Polysaccharide deacetylase. (283 aa)    
Predicted Functional Partners:
CQD06494.1
Membrane sugar transferase.
 
 
 0.688
CQD04847.1
Glycosyl transferase family protein.
  
 
 0.643
CQD08700.1
Glycosyl transferase family protein.
  
 
 0.643
CQD13141.1
Glycosyl transferase family protein.
  
 
 0.643
CQD04221.1
Integral membrane protein.
  
  
 0.471
CQD20091.1
Hypothetical protein.
     
 0.435
CQD22337.1
Endo-beta-mannanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.422
CQD13085.1
Glycosyl transferase family protein.
 
 
 0.416
losA
Glycosyltransferase, LosA.
 
 
 0.413
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.