STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD12422.1Putative alanine and leucine rich protein. (886 aa)    
Predicted Functional Partners:
CQD12426.1
Transglutaminase.
 
  
 0.985
CQD12401.1
Transglutaminase.
 
  
 0.924
CQD17322.1
Transglutaminase domain-containing protein.
 
  
 0.893
CQD13482.1
Transglutaminase domain-containing protein.
 
  
 0.886
CQD02978.1
Transglutaminase.
 
  
 0.884
gcs2_1
Glutamate--cysteine ligase, Gcs2; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
 
 
0.853
CQD02417.1
Ferredoxin-dependent glutamate synthase 1.
    
  0.845
CQD17324.1
Putative alanine and leucine rich protein.
 
  
0.776
CQD12405.1
Hypothetical protein.
 
     0.751
gcs2_2
Glutamate--cysteine ligase, Gcs2.
 
  
0.744
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.