STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD13806.1Hypothetical protein. (162 aa)    
Predicted Functional Partners:
CQD13794.1
Flavoprotein.
 
  
  0.683
CQD13798.1
Pigment production hydroxylase.
 
     0.673
CQD13796.1
Biphenyl-2,3-diol 1,2-dioxygenase 1.
 
     0.655
CQD13802.1
Short-chain dehydrogenase/reductase SDR.
 
  
  0.655
CQD14079.1
Hypothetical protein.
  
     0.640
CQD13799.1
FAD dependent oxidoreductase.
       0.566
CQD04899.1
succinyl-CoA:3-ketoacid-coenzyme A transferase 1; Belongs to the 3-oxoacid CoA-transferase family.
    
  0.545
CQD07863.1
3-ketosteroid-delta-1-dehydrogenase.
  
  
 0.543
CQD16651.1
F420-dependent methylene-tetrahydromethanopterin reductase.
 
     0.531
CQD21130.1
Putative aminoglycoside phosphotransferase.
  
     0.460
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.