STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD14567.1Short chain dehydrogenase. (255 aa)    
Predicted Functional Partners:
CQD10451.1
Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.993
fas
Fatty acid synthase Fas.
  
 0.978
CQD03871.1
Dehydrogenase.
    
  0.847
CQD13553.1
RifB protein.
  
 0.839
CQD13555.1
Erythronolide synthase, modules 3 and 4.
  
 0.839
CQD15500.1
Erythronolide synthase, modules 3 and 4.
  
 0.828
CQD02417.1
Ferredoxin-dependent glutamate synthase 1.
     
 0.800
CQD08263.1
Oxidoreductase, zinc-binding dehydrogenase family protein.
    
  0.777
CQD14570.1
SnoaL-like polyketide cyclase.
       0.723
CQD02265.1
Polyketide synthase.
  
 0.700
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.