STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD14926.1Diguanylate cyclase/phosphodiesterase. (756 aa)    
Predicted Functional Partners:
CQD16839.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.996
CQD22017.1
Stage II sporulation protein E (SpoIIE).
  
 0.996
CQD02755.1
Diguanylate phosphodiesterase.
 
0.994
CQD20392.1
EAL domain-containing protein.
 
0.994
CQD08640.1
PAS/PAC sensor-containing diguanylate cyclase.
 
0.980
CQD08646.1
PAS/PAC sensor-containing diguanylate cyclase.
 
0.980
CQD15028.1
Diguanylate phosphodiesterase.
 
0.965
CQD19234.1
Cyclic diguanylate phosphodiesterase domain-containing protein.
 
0.951
CQD23936.1
Integral membrane sensor signal transduction histidine kinase.
   
 0.928
CQD20089.1
Cyclic diguanylate phosphodiesterase domain-containing protein.
 
 
0.884
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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