STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD15774.1Mannan-binding protein. (256 aa)    
Predicted Functional Partners:
CQD15770.1
Mce associated membrane protein.
       0.858
CQD15762.1
Mce related protein.
       0.778
CQD15766.1
Mce related protein.
       0.778
CQD15750.1
Virulence factor Mce.
       0.776
CQD15758.1
Virulence factor Mce.
       0.751
CQD15754.1
Virulence factor Mce family protein.
       0.750
CQD15746.1
Mce related protein.
       0.749
yrbE5A
YrbE family protein, YrbE5A.
       0.706
CQD15741.1
ABC-transporter integral membrane protein.
       0.706
CQD15778.1
Methyltransferase, putative, family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity.
       0.551
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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