STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD16968.1Putative PAS/PAC sensor protein. (218 aa)    
Predicted Functional Partners:
CQD19640.1
Amino acid ABC transporter substrate-binding protein.
  
 
 0.815
CQD24306.1
Putative reductase.
  
     0.716
CQD17259.1
Putative reductase.
  
     0.709
CQD12430.1
Putative integral membrane protein.
  
     0.538
CQD10870.1
Hypothetical protein.
  
     0.531
hemD
uroporphyrin-III C-methyltransferase HemD.
  
 
 0.530
CQD16971.1
Diguanylate cyclase/phosphodiesterase.
       0.508
CQD06822.1
3-oxoacyl-ACP synthase.
  
     0.498
CQD14072.1
Hypothetical protein.
  
     0.491
CQD13417.1
30S ribosomal protein S1.
  
    0.437
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.