STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD17120.1Hypothetical protein. (422 aa)    
Predicted Functional Partners:
cysK1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
       0.858
cysE
Serine O-acetyltransferase.
       0.858
CQD16839.1
PAS/PAC sensor hybrid histidine kinase.
   
 0.751
CQD22017.1
Stage II sporulation protein E (SpoIIE).
   
 0.751
CQD02755.1
Diguanylate phosphodiesterase.
   
 0.656
CQD20392.1
EAL domain-containing protein.
   
 0.656
CQD08640.1
PAS/PAC sensor-containing diguanylate cyclase.
    
  0.626
CQD08646.1
PAS/PAC sensor-containing diguanylate cyclase.
    
  0.626
CQD17117.1
Major membrane protein 1.
   
   0.497
CQD04221.1
Integral membrane protein.
    
  0.440
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.