STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CQD18055.1Beta subunit of hydroxylase component of benzoate 1,2-dioxygenase. (176 aa)    
Predicted Functional Partners:
CQD18061.1
Dioxygenase large subunit.
 
 0.996
CQD22606.1
Ring hydroxylating dioxygenase subunit alpha.
 
 0.983
CQD17622.1
Rieske (2Fe-2S) domain-containing protein.
 
 0.966
CQD17660.1
Rieske (2Fe-2S) domain-containing protein.
 
 0.965
CQD09132.1
Ring-hydroxylating dioxygenase, large terminal subunit.
 
 0.958
CQD18562.1
Rieske (2Fe-2S) domain-containing protein.
 
 0.958
CQD03228.1
Dioxygenase.
 
 0.957
CQD14005.1
Rieske (2Fe-2S) domain-containing protein.
 
 0.955
CQD03097.1
Rieske (2Fe-2S) domain-containing protein.
 
 0.953
CQD03479.1
Rieske (2Fe-2S) domain-containing protein.
 
 0.952
Your Current Organism:
Mycobacterium lentiflavum
NCBI taxonomy Id: 141349
Other names: ATCC 51985, CCUG 42422, CCUG 42559, CIP 105465, DSM 44418, JCM 13390, M. lentiflavum, strain 2186/92
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