Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CQD13138.1 | CQD13553.1 | BN1232_02549 | BN1232_02699 | Linear gramicidin synthetase subunit B. | RifB protein. | 0.999 |
CQD13138.1 | CQD13555.1 | BN1232_02549 | BN1232_02701 | Linear gramicidin synthetase subunit B. | Erythronolide synthase, modules 3 and 4. | 0.999 |
CQD13138.1 | CQD17231.1 | BN1232_02549 | BN1232_03801 | Linear gramicidin synthetase subunit B. | Linear gramicidin synthetase subunit D. | 0.999 |
CQD13138.1 | CQD17342.1 | BN1232_02549 | BN1232_03854 | Linear gramicidin synthetase subunit B. | Beta-ketoacyl synthase. | 0.999 |
CQD13138.1 | CQD19420.1 | BN1232_02549 | BN1232_04550 | Linear gramicidin synthetase subunit B. | acyl-CoA synthetase. | 0.922 |
CQD13138.1 | fas | BN1232_02549 | BN1232_04263 | Linear gramicidin synthetase subunit B. | Fatty acid synthase Fas. | 0.999 |
CQD13138.1 | mas | BN1232_02549 | BN1232_01931 | Linear gramicidin synthetase subunit B. | Multifunctional mycocerosic acid synthase membrane-associated MAS. | 0.999 |
CQD13138.1 | ppsC | BN1232_02549 | BN1232_01939 | Linear gramicidin synthetase subunit B. | Phenolpthiocerol synthesis type-I polyketide synthase PpsC. | 0.999 |
CQD13138.1 | ppsD | BN1232_02549 | BN1232_01938 | Linear gramicidin synthetase subunit B. | Phenolpthiocerol synthesis type-I polyketide synthase PpsD. | 0.999 |
CQD13553.1 | CQD13138.1 | BN1232_02699 | BN1232_02549 | RifB protein. | Linear gramicidin synthetase subunit B. | 0.999 |
CQD13553.1 | CQD13555.1 | BN1232_02699 | BN1232_02701 | RifB protein. | Erythronolide synthase, modules 3 and 4. | 0.998 |
CQD13553.1 | CQD17231.1 | BN1232_02699 | BN1232_03801 | RifB protein. | Linear gramicidin synthetase subunit D. | 0.999 |
CQD13553.1 | CQD17342.1 | BN1232_02699 | BN1232_03854 | RifB protein. | Beta-ketoacyl synthase. | 0.999 |
CQD13553.1 | CQD19420.1 | BN1232_02699 | BN1232_04550 | RifB protein. | acyl-CoA synthetase. | 0.880 |
CQD13553.1 | fas | BN1232_02699 | BN1232_04263 | RifB protein. | Fatty acid synthase Fas. | 0.999 |
CQD13553.1 | mas | BN1232_02699 | BN1232_01931 | RifB protein. | Multifunctional mycocerosic acid synthase membrane-associated MAS. | 0.999 |
CQD13553.1 | ppsC | BN1232_02699 | BN1232_01939 | RifB protein. | Phenolpthiocerol synthesis type-I polyketide synthase PpsC. | 0.999 |
CQD13553.1 | ppsD | BN1232_02699 | BN1232_01938 | RifB protein. | Phenolpthiocerol synthesis type-I polyketide synthase PpsD. | 0.999 |
CQD13555.1 | CQD13138.1 | BN1232_02701 | BN1232_02549 | Erythronolide synthase, modules 3 and 4. | Linear gramicidin synthetase subunit B. | 0.999 |
CQD13555.1 | CQD13553.1 | BN1232_02701 | BN1232_02699 | Erythronolide synthase, modules 3 and 4. | RifB protein. | 0.998 |
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